Harbor-UCLA
Harbor-UCLA

Division of Genomic Outcomes

LocationThe Institute for Translational Genomics and Population Sciences
The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center
1124 W. Carson Street
Torrance, CA 90502
Email daunet@lundquist.org
Daune Thorington

The Division of Genomic Outcomes is the Common Disease Genetics Program of the Institute for Translational Genomics and Population Sciences. The Genomics Institute was founded in June/July of 2013, and therefore has been in existence 7 and a half years. There are 6 faculty in the Common Disease Genetics Program – Professor Yii-Der Ida Chen, Professor Xiuqing Guo, Associate Professor Xiaohui Li, Professor Henry Lin, Professor Kent D. Taylor, and Professor Jerome I. Rotter.

Their research is in the genetics of common, complex diseases, i.e. the earliest determinants of what are for the most part adult diseases but with the origins of their pathophysiology in childhood. They have and are contributing to our knowledge of the genetic basis of cardiometabolic disorders (atherosclerosis, coronary artery disease, valvular heart disease, arrhythmias and EKG variation, blood pressure and hypertension, lipid disorders, nonalcoholic fatty liver disease, obesity, diabetes, diabetic kidney disease, diabetic eye disease, and insulin resistance), eye diseases (diabetic retinopathy, keratoconus, glaucoma, macular degeneration, retinopathy of prematurity, retinal vasculature), and pharmacogenetics (genetic determinants of response to a therapy). Their work (which is intensively collaborative) has utilized a variety of paradigms, from family based, to case-control, to cohort, to pharmacogenetic studies, and from candidate gene, to family based linkage, to genome-wide association, to large scale specialized genotyping and sequencing, to whole exome and whole genome sequencing. These studies have included deep phenotyping and biochemical analyses, and have now entered the multi-omics era with studies of methylomics, transcriptomics, metabolomics, and proteomics. These studies involve hundreds to hundreds of thousands of subjects and from a handful to hundreds of investigators, the epitome of what is termed team science. Members of the Genomics Institute have been especially active in multiethnic studies including those in Caucasian, Hispanic, African-Americans, and Chinese populations. In the process, they helped delineate the genetic architecture of diabetes and insulin resistance, of blood pressure and hypertension, of lipid disorders and coronary artery disease, of cardiac arrhythmias and EKG variation and sudden cardiac death, of obesity and fatty liver, and of diabetic retinopathy and glaucoma, in multiple ethnic groups. The ultimate goal of this work is to identify the optimal therapy and prevention for cardiometabolic and ocular disorders as a function of an individual’s genetic predispositions, which are being defined by phenotypic specific polygenic risk scores. Thus, this is the basis for precision/personalized medicine, especially in minority populations.

Since the beginning of the program at Lundquist/Harbor-UCLA in mid-2013, the 6 faculty have contributed to some 526 peer review publications (for the entire 10 faculty of the Genomics Institute, the total is 580). To introduce the program, we have listed, as examples, 100 of these publications, 55 of which have been published in the world’s leading biomedical journals, i.e. the New England Journal of Medicine, Journal of the American Medical Association, Nature, Science, Cell, and Nature Genetics. An additional 28 have been published in journals with an impact factor greater than 10 and often the lead specialty journal in its field (American Journal of Human Genetics, Cell Metabolism, Circulation, Circulation Research, Diabetes Care, European Heart Journal, Genome Research, Journal of Clinical Investigation, Journal of the American College of Cardiology, Nature Communications, PLOS Medicine, and Science Translational Medicine). (Any individual article can be obtained by inquiring to Daune Thorington, daunet@lundquist.org, as well as the list of the entire 526 or 580 papers respectively.) These papers are listed in 10 scientific areas related to diabetes (and associated obesity), cardiovascular disease (including EKG variation), as well as its risk factors (lipids, hypertension), ocular disorders, and genetics of response to therapeutics for these disorders (the discipline of pharmacogenetics), as well as selected other common diseases and population genetics papers.

Leadership

Jerome I. Rotter, MD Distinguished Professor of Pediatrics and Human Genetics David Geffen School of Medicine at UCLA Director, The Institute for Translational Genomic and Population Sciences The Lundquist Institute for Biomedical Innovation Chief, Division of Genomic Outcomes Harbor-UCLA Medical Center The Lundquist Institute Profile
jrotter@lundquist.org

Jerome I. Rotter, M.D. is a medical geneticist/geneticist epidemiologist. He is Director of the Institute for Translational Genomics and Population Sciences at the Lundquist Institute for Biomedical Innovation (formerly the Los Angeles Biomedical Research Institute) at Harbor-UCLA, Director of the Division of Genomic Outcomes in the Department of Pediatrics and Medicine, Harbor-UCLA Medical Center (the southern campus of the UCLA School of Medicine), and a Distinguished Professor of Pediatrics and Human Genetics at UCLA. He is a Los Angeles native, and a product of UCLA (undergraduate, medical school, and UCLA affiliated hospitals for postgraduate work). He was a Harbor-UCLA intern, a Wadsworth VA resident, and a Harbor-UCLA Medical Genetics fellow. He has been a UCLA faculty member since 1978, first at Harbor-UCLA (1978-1986), then at UCLA-affiliated Cedars-Sinai (1986-2013), and now again at Harbor-UCLA (2013-present).

Dr. Rotter’s research is in the genetics of common, complex diseases, i.e. the earliest determinants of what are for the most part adult diseases but with the origins of their pathophysiology in childhood. He has contributed to our knowledge of the genetic basis of cardiometabolic disorders (atherosclerosis, coronary artery disease, valvular heart disease, arrhythmias and EKG variation, blood pressure and hypertension, lipid disorders, nonalcoholic fatty liver diseases, obesity, diabetes, diabetic kidney disease, and insulin resistance), autoimmune/inflammatory/gastrointestinal disorders (type 1 diabetes, inflammatory bowel disease, systemic lupus, coeliac disease, peptic ulcer), eye diseases (diabetic retinopathy, keratoconus, glaucoma, macular degeneration, myopia, retinopathy of prematurity), and pharmacogenetics (genetic determinants of response to a therapy). His work (which is intensively collaborative) has utilized a variety of paradigms, from family based, to case-control, to cohort, to pharmacogenetic studies, and from subclinical phenotypes, to candidate gene, to family based linkage, to genome-wide association, to large scale genome-wide genotyping and sequencing, to whole exome and whole genome sequencing, and to multi-omics. These studies involve hundreds to hundreds of thousands of subjects and from a handful to hundreds of investigators, the epitome of what is termed team science. Dr. Rotter and colleagues have been especially active in multiethnic studies including those in Caucasian, Hispanic, African-Americans, Chinese, Armenian, and Jewish populations. In the process, they helped delineate the genetic architecture of diabetes and insulin resistance, of blood pressure and hypertension, of lipid disorders and coronary artery disease, of cardiac rhythm disorders and sudden cardiac death, of obesity and fatty liver, and of diabetic retinopathy and glaucoma, in multiple ethnic groups. The ultimate goal of this work is to identify the optimal therapy and prevention for cardiometabolic and ocular disorders as a function of an individual’s genetic predispositions, often through what is termed polygenic risk scores. Thus, this is the basis for precision/personalized medicine, especially in minority populations.

Dr. Rotter has published some 826 peer reviewed articles (427 since 2013) and over 150 other publications (reviews, chapters, editorials, letters), and 5 books, the most notable being the two editions of King, Rotter, Motulsky’s Genetic Basis of Common Disease. 98 of his articles have appeared in the New England Journal of Medicine, Journal of the American Medical Association, Nature, Science, Lancet, Cell, and Nature Genetics (52 since 2013). Dr. Rotter has been the recipient of an NIAMDD Clinical Investigator Award, the Ross Joseph St. Gene Award for Investigator of the Western Society for Pediatric Research; was elected to fellowship in the American College of Physicians, American College of Medical Genetics, the American Gastroenterological Association, and the American Heart Association; and to membership in the Society for Pediatric Research, the American Society for Clinical Investigation, the American Association of Physicians, and the American Pediatric Society. He is also a recipient of the Legends of Harbor-UCLA Medical Center Award, the Cedars-Sinai Pioneer in Medicine Award, and the CHARGE Senior Leadership Award. Dr. Rotter serves on the Steering Committees of TOPMed (NHLBI’s Trans-Omics for Precision Medicine; PI of MESA WGS TOPMed and the TOPMed Multi-Omics projects, also a convener of the diabetes and lipid working groups, respectively); CHARGE (Cohorts for Heart and Aging Research in Genomic Epidemiology; chair, Genotyping Committee; convener of the exome chip, metabolomics, and polygenic risk assessment working groups respectively); and MESA (Multi-Ethnic Study of Atherosclerosis; chair, Genetics Committee; PI of MESA Family, MESA SHARE GWAS, and MESA TOPMed studies). Dr. Rotter serves on the External Advisory Boards of the Precision Medicine Programs of two health systems, in Nevada (Nevada Institute for Personalized Medicine), and in South Dakota (Sanford Imagenetics).

Faculty & Administration

Yii-Der Ida Chen, PhD Professor of PediatricsDavid Geffen School of Medicine at UCLA Director, Laboratory for Biochemistry, Molecular Phenotyping, and Microarray The Institute for Translational Genomics and Population Sciences The Lundquist Institute for Biomedical Innovation
ichen@lundquist.org
Kent D. Taylor, PhD Professor of PediatricsDavid Geffen School of Medicine at UCLA Director, Laboratory for Molecular Genomics, Bioinformatics and High Throughput Genotyping The Institute for Translational Genomics and Population Sciences The Lundquist Institute for Biomedical Innovation The Lundquist Institute Profile
ktaylor@lundquist.org
Henry J. Lin, MD Professor of Pediatrics David Geffen School of Medicine at UCLA Investigator, The Institute for Translational Genomic and Population SciencesThe Lundquist Institute for Biomedical Innovation Chief, Division of Medical Genetics Harbor-UCLA Medical Center The Lundquist Institute Profile
hlin@lundquist.org
Xiuqing Guo, PhD Professor of PediatricsDavid Geffen School of Medicine at UCLA Director, Laboratory of Statistical and Mathematical Genetics The Institute for Translational Genomics and Population Sciences The Lundquist Institute for Biomedical Innovation The Lundquist Institute Profile
xguo@lundquist.org
Xiaohui Li, MD, MS Associate Professor of Pediatrics David Geffen School of Medicine at UCLA Genetic Epidemiology and Statistical Genetics The Institute for Translational Genomics and Population Sciences The Lundquist Institute for Biomedical Innovation The Lundquist Institute Profile
xiaohuili@lundquist.org
Daune B. Thorington Administrative Manager to Jerome I. Rotter, MD; The Institute for Translational Genomics and Population SciencesThe Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center

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